STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SQORPyr_redox_2 domain-containing protein. (450 aa)    
Predicted Functional Partners:
U3I543_ANAPP
Uncharacterized protein.
     
  0.900
ENSAPLP00000030443
Uncharacterized protein.
     
  0.900
SUOX
Sulfite oxidase.
   
 0.873
FDX1
Ferredoxin 1.
  
 0.734
ATP5PO
Uncharacterized protein.
    
 
 0.602
ATP5F1A
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.599
ENSAPLP00000024321
Rieske domain-containing protein.
  
 
 0.595
MRPL44
Mitochondrial ribosomal protein L44.
  
 
 0.577
MPST
Sulfurtransferase.
  
 0.574
TST
Sulfurtransferase.
   
 0.557
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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