STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC39ATetratricopeptide repeat domain 39A. (581 aa)    
Predicted Functional Partners:
U3J390_ANAPP
Uncharacterized protein.
      
 0.611
SYT8
Synaptotagmin 8.
   
  
 0.597
GPR149
G protein-coupled receptor 149.
      
 0.587
RNF152
Ring finger protein 152.
      
 0.586
GALNT3
Polypeptide N-acetylgalactosaminyltransferase.
   
  
 0.558
GTSF1
Uncharacterized protein.
      
 0.551
PNLDC1
PARN like, ribonuclease domain containing 1.
      
 0.542
FKBP6
Peptidylprolyl isomerase.
      
 0.487
TSPAN1
Tetraspanin.
 
    
 0.485
GCNT2
Glucosaminyl (N-acetyl) transferase 2 (I blood group).
      
 0.482
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.