Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PRTGProtogenin. (1165 aa)    
Predicted Functional Partners:
KLHDC7A
Kelch domain containing 7A.
      
 0.584
CAPSL
Calcyphosine like.
    
 
 0.582
ARPP19
cAMP regulated phosphoprotein 19; Protein phosphatase inhibitor that specifically inhibits protein phosphatase 2A (PP2A) during mitosis. Belongs to the endosulfine family.
      
 0.548
RSL24D1
Ribosomal L24 domain containing 1.
      
 0.546
LRFN2
Leucine rich repeat and fibronectin type III domain containing 2.
    
 0.501
CGNL1
Cingulin like 1.
      
 0.497
AMOTL1
Angiomotin like 1.
     
 0.495
AMOT
Angiomotin.
     
 0.495
CHMP4B
Charged multivesicular body protein 4B.
      
 0.479
CHMP4C
Charged multivesicular body protein 4C.
      
 0.479
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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