STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPRHeterogeneous nuclear ribonucleoprotein R. (609 aa)    
Predicted Functional Partners:
GEMIN2
Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.
      
 0.749
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.698
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
0.676
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.657
ENSAPLP00000024338
RRM domain-containing protein.
    
 
 0.653
IGF2BP1
Insulin like growth factor 2 mRNA binding protein 1.
    
 
 0.653
TARDBP
TAR DNA binding protein.
   
 0.622
U3I8U0_ANAPP
B30.2/SPRY domain-containing protein.
   
 0.611
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.605
U3J272_ANAPP
RRM domain-containing protein.
   
 0.598
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.