STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP2Matrix metallopeptidase 2. (663 aa)    
Predicted Functional Partners:
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.926
HBEGF
Heparin binding EGF like growth factor.
    
  0.912
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.850
COL3A1
Uncharacterized protein.
   
 0.665
COL1A1
Collagen type I alpha 1 chain.
   
 0.665
PLAU
Uncharacterized protein.
   
 0.645
CDH1
Uncharacterized protein.
     
 0.618
SCUBE3
Signal peptide, CUB domain and EGF like domain containing 3.
   
 0.606
ACTB
Actin beta.
   
 
 0.605
ENSAPLP00000017035
Uncharacterized protein.
   
 
 0.605
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.