STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOM1L1Target of myb1 like 1 membrane trafficking protein; Belongs to the TOM1 family. (472 aa)    
Predicted Functional Partners:
STXBP4
Syntaxin binding protein 4.
 
    
 0.766
TOLLIP
Toll interacting protein.
    
 
 0.664
MAP3K21
Mitogen-activated protein kinase kinase kinase.
    
 0.635
MMD
Monocyte to macrophage differentiation associated.
      
 0.619
PCTP
Phosphatidylcholine transfer protein.
      
 0.611
THEMIS2
Thymocyte selection associated family member 2.
      
 0.611
ANGPTL5
Angiopoietin like 5.
      
 0.603
RABGEF1
Uncharacterized protein.
     
 0.592
ENSAPLP00000018918
Death domain-containing protein.
      
 0.586
COX11
Cytochrome c oxidase copper chaperone COX11.
      
 0.586
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.