STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C5General transcription factor IIIC subunit 5. (435 aa)    
Predicted Functional Partners:
GTF3C3
General transcription factor IIIC subunit 3.
   
 0.977
GTF3C4
General transcription factor IIIC subunit 4.
   
 0.976
GTF3C1
General transcription factor IIIC subunit 1.
   
 0.975
BDP1
SANT domain-containing protein.
    
 0.954
ENSAPLP00000020086
TFIIB domain-containing protein.
    
 0.833
ENSAPLP00000020531
TFIIB-type domain-containing protein.
    
 0.833
U3IEY2_ANAPP
Uncharacterized protein.
    
 0.816
GTF3C6
General transcription factor IIIC subunit 6.
     
  0.784
BRF2
BRF2 RNA polymerase III transcription initiation factor subunit.
    
 0.761
POLR3C
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.758
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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