STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HALHistidine ammonia-lyase; Belongs to the PAL/histidase family. (660 aa)    
Predicted Functional Partners:
UROC1
Urocanate hydratase 1.
 
 
 0.985
CNDP2
Carnosine dipeptidase 2.
    
 0.961
AMDHD1
Amidohydrolase domain containing 1.
 
 
 0.940
CNDP1
Carnosine dipeptidase 1.
    
 0.922
HDC
Histidine decarboxylase.
     
 0.920
GDA
Guanine deaminase.
  
 
 0.854
AGMAT
Agmatinase; Belongs to the arginase family.
  
 
 0.845
ARG2
Arginase.
  
 
 0.845
FTCD
Formimidoyltransferase cyclodeaminase.
  
  
 0.758
GLDC
Glycine decarboxylase.
   
  
 0.680
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.