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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC134Coiled-coil domain containing 134. (242 aa)    
Predicted Functional Partners:
HAUS8
HAUS augmin like complex subunit 8.
      
 0.716
FBXW5
F-box and WD repeat domain containing 5.
      
 0.716
FKBP10
Peptidylprolyl isomerase.
    
 0.639
MESD
Mesoderm development LRP chaperone.
      
 0.621
KDELR2
ER lumen protein-retaining receptor.
      
 0.612
MBTPS2
Membrane bound transcription factor peptidase, site 2.
      
 0.611
TMEM38B
Transmembrane protein 38B.
      
 0.611
TENT5A
Terminal nucleotidyltransferase 5A.
      
 0.610
SEC24D
SEC24 homolog D, COPII coat complex component.
    
 
 0.591
ENSAPLP00000018815
Uncharacterized protein.
    
 
 0.591
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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