STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BLVRABiliverdin reductase A. (302 aa)    
Predicted Functional Partners:
BLVRB
Uncharacterized protein.
   
 
 0.988
HMOX1
Heme oxygenase 1.
     
 0.968
HMOX2
Heme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase.
     
 0.963
ENSAPLP00000022337
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
     
 0.934
ENSAPLP00000016406
Uncharacterized protein.
     
  0.900
TBX20
Uncharacterized protein.
    
   0.827
PHF13
PHD finger protein 13.
    
   0.705
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.699
CPOX
Uncharacterized protein.
   
 
 0.653
C7orf25
Chromosome 7 open reading frame 25.
      
 0.620
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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