STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOXLysyl oxidase. (251 aa)    
Predicted Functional Partners:
U3I8F7_ANAPP
Uncharacterized protein.
 
 
 
 0.921
U3IS20_ANAPP
Uncharacterized protein.
 
 
  0.778
FBLN5
Fibulin 5.
   
 0.661
ENSAPLP00000025208
Uncharacterized protein.
   
 0.630
ENSAPLP00000022394
Uncharacterized protein.
 
 
  0.580
U3IHW7_ANAPP
Uncharacterized protein.
 
  
  0.514
FBN1
Fibrillin 1.
   
 
 0.509
SPARC
Secreted protein acidic and cysteine rich.
   
 
 0.432
PTPRE
Protein tyrosine phosphatase receptor type E.
    
 0.420
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.