STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTLL6Uncharacterized protein. (797 aa)    
Predicted Functional Partners:
CRMP1
Collapsin response mediator protein 1.
    
   0.705
BTBD8
BTB domain containing 8.
      
 0.665
ARL13B
ADP ribosylation factor like GTPase 13B.
      
 0.655
RFX4
Regulatory factor X4.
      
 0.654
SNX11
Sorting nexin 11.
      
 0.653
CEP104
Centrosomal protein 104.
      
 0.646
CDK5RAP3
CDK5 regulatory subunit associated protein 3.
      
 0.637
U3IWQ8_ANAPP
Uncharacterized protein.
      
 0.599
PLEKHM3
Pleckstrin homology domain containing M3.
   
  
 0.585
CEP41
Centrosomal protein 41.
      
 0.556
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.