STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEPHS1Selenophosphate synthetase 1. (304 aa)    
Predicted Functional Partners:
SEPSECS
Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase.
     
 0.978
SCLY
Selenocysteine lyase.
    
 0.975
TXNRD2
Thioredoxin reductase 2.
  
 
 0.926
TXNRD3
Thioredoxin reductase 3.
  
 
 0.921
TXNRD1
Thioredoxin reductase 1.
  
 
 0.921
RPS24
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
 
    
 0.869
MOCOS
Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.
    
 0.832
U3IF54_ANAPP
RF_PROK_I domain-containing protein.
     
 0.633
EEFSEC
Eukaryotic elongation factor, selenocysteine-tRNA specific.
     
 0.625
TSTD3
Rhodanese domain-containing protein.
    
 0.621
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.