STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H12BZinc finger CCCH-type containing 12B. (837 aa)    
Predicted Functional Partners:
MTMR8
Myotubularin related protein 8.
      
 0.553
ZC4H2
Zinc finger C4H2-type containing.
      
 0.544
RC3H2
Ring finger and CCCH-type domains 2.
   
  
 0.520
RC3H1
Ring finger and CCCH-type domains 1.
      
 0.497
ENSAPLP00000026620
Uncharacterized protein.
      
 0.497
OPTN
Optineurin.
    
  0.478
THOC3
THO complex 3.
      
 0.443
RNF220
Ring finger protein 220.
      
 0.431
TANK
TRAF family member associated NFKB activator.
   
 
 0.423
NUP85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
      
 0.415
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.