Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC16A12Solute carrier family 16 member 12. (470 aa)    
Predicted Functional Partners:
PRPF6
Pre-mRNA processing factor 6.
      
 0.680
REV3L
Uncharacterized protein.
    
 
 0.617
ELP4
Uncharacterized protein.
      
 0.570
CH25H
Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family.
      
 0.563
ANKRD33B
Ankyrin repeat domain 33B.
    
 
 0.545
ANKRD33
Ankyrin repeat domain 33.
    
 
 0.545
ENSAPLP00000017251
Uncharacterized protein.
      
 0.544
ATRIP
ATR interacting protein.
      
 0.542
EFHC2
EF-hand domain containing 2.
      
 0.539
IFT27
Intraflagellar transport 27.
      
 0.534
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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