STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERC2ELKS/RAB6-interacting/CAST family member 2. (699 aa)    
Predicted Functional Partners:
RIMS2
C2 domain-containing protein.
   
 
 0.912
ENSAPLP00000029757
Uncharacterized protein.
   
 
 0.912
RIMS3
Regulating synaptic membrane exocytosis 3.
   
 
 0.714
RIMS1
Regulating synaptic membrane exocytosis 1.
   
 
 0.714
PHLDB2
Pleckstrin homology like domain family B member 2.
    
 
 0.713
PPFIA1
PTPRF interacting protein alpha 1.
   
 
 0.672
PPFIA4
PTPRF interacting protein alpha 4.
   
 
 0.672
PPFIA2
PTPRF interacting protein alpha 2.
   
 
 0.672
KIAA0930
KIAA0930.
    
 
 0.660
SYDE1
Synapse defective Rho GTPase homolog 1.
    
 
 0.636
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.