Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYOM3Myomesin 3. (1429 aa)    
Predicted Functional Partners:
MYOM2
Myomesin 2.
   
0.939
MYOM1
Myomesin 1.
    
 
0.905
MYOZ2
Myozenin 2.
   
  
 0.769
TMEM50A
Transmembrane protein 50A.
      
 0.642
TNNI1
Troponin I1, slow skeletal type.
   
 
 0.588
SMYD1
SET and MYND domain containing 1.
   
 
 0.575
MYOT
Myotilin.
   
  
 0.574
ENSAPLP00000024705
EHD_N domain-containing protein.
   
 
 0.557
ZNF407
Zinc finger protein 407.
   
 0.556
RNF115
Ring finger protein 115.
    
 
 0.547
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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