STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SREK1Splicing regulatory glutamic acid and lysine rich protein 1. (311 aa)    
Predicted Functional Partners:
ENSAPLP00000020690
Uncharacterized protein.
 
      0.900
SREK1IP1
SREK1 interacting protein 1.
      
 0.837
PNISR
PNN interacting serine and arginine rich protein.
   
 
 0.826
LRRC40
Leucine rich repeat containing 40.
   
  
 0.751
CREG2
Cellular repressor of E1A stimulated genes 2.
      
 0.749
LEMD3
LEM domain containing 3.
   
 
 0.737
U3J272_ANAPP
RRM domain-containing protein.
   
 0.733
PRPF39
Pre-mRNA processing factor 39.
   
  
 0.716
SRSF2
RRM domain-containing protein.
   
 0.710
SRSF1
Uncharacterized protein.
   
 0.644
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.