STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAD4Mothers against decapentaplegic homolog. (551 aa)    
Predicted Functional Partners:
SMAD2
Mothers against decapentaplegic homolog.
   
0.980
SMAD1
Mothers against decapentaplegic homolog.
   
0.977
SMAD3
Mothers against decapentaplegic homolog.
   
0.970
SKI
SKI proto-oncogene.
   
 0.967
SKIL
SKI like proto-oncogene.
   
 0.954
SMAD5
Mothers against decapentaplegic homolog.
   
0.943
SMAD9
Mothers against decapentaplegic homolog.
   
0.907
USP9X
USP domain-containing protein; Belongs to the peptidase C19 family.
   
 0.901
BMP4
Bone morphogenetic protein 4.
    
 0.849
TRIM33
Tripartite motif containing 33.
   
 0.844
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.