STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TXLNBTaxilin beta. (683 aa)    
Predicted Functional Partners:
PAFAH2
Platelet-activating factor acetylhydrolase.
      
 0.611
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
      
 0.611
LRRC17
Leucine rich repeat containing 17.
      
 0.610
NCLN
Nicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning.
   
  
 0.591
TBC1D12
TBC1 domain family member 12.
      
 0.587
U3IKX2_ANAPP
Uncharacterized protein.
      
 0.586
CPLX3
Complexin 3.
      
 0.586
IFT80
Intraflagellar transport 80.
      
 0.493
TXLNA
Taxilin alpha.
  
 
  
0.492
PRPF6
Pre-mRNA processing factor 6.
      
 0.491
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.