Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
USPL1Ubiquitin specific peptidase like 1. (1088 aa)    
Predicted Functional Partners:
DESI1
Desumoylating isopeptidase 1.
      
 0.728
USP22
Ubiquitinyl hydrolase 1.
    
 0.686
INTS14
Integrator complex subunit 14.
    
 0.681
RANGAP1
Ran GTPase activating protein 1.
    
 0.677
SENP6
SUMO specific peptidase 6.
    
 
 0.667
SUMO2
Small ubiquitin-related modifier.
    
 0.652
ENSAPLP00000029099
Ubiquitin-like domain-containing protein.
    
 0.652
INTS13
Integrator complex subunit 13.
      
 0.628
INTS10
Integrator complex subunit 10.
   
 
 0.602
INTS11
Integrator complex subunit 11.
    
 0.601
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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