Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTLTubulin tyrosine ligase. (378 aa)    
Predicted Functional Partners:
VASH1
Vasohibin 1.
      
 0.868
TUBB
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.820
EDC3
Enhancer of mRNA decapping 3.
    
 
 0.779
TUBB4B
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.740
HCFC2
Host cell factor C2.
      
 0.702
LRRC49
Leucine rich repeat containing 49.
   
 0.675
TPGS1
Tubulin polyglutamylase complex subunit 1.
    
 0.675
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
  
 0.651
TPGS2
Tubulin polyglutamylase complex subunit 2.
   
  0.648
CLIP1
CAP-Gly domain containing linker protein 1.
      
 0.646
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.