Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC6A2Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (618 aa)    
Predicted Functional Partners:
SNCA
Alpha-synuclein; Belongs to the synuclein family.
    
 
 0.915
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
      
 0.871
CLPTM1L
CLPTM1 like.
      
 0.871
NFATC2
Nuclear factor of activated T cells 2.
      
 0.871
HOXA5
Homeobox A5.
      
 0.868
SLC18A2
Solute carrier family 18 member A2.
   
 
 0.689
DRD4
Dopamine receptor D4; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.632
GLRB
Glycine receptor beta; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.610
NGB
Neuroglobin; Belongs to the globin family.
      
 0.600
PICK1
Protein interacting with PRKCA 1.
    
 
 0.581
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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