Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEMA3CSemaphorin 3C; Belongs to the semaphorin family. (751 aa)    
Predicted Functional Partners:
PLXND1
Plexin D1.
    
 0.814
NRP1
Neuropilin; Belongs to the neuropilin family.
  
 
 0.792
NRP2
Neuropilin; Belongs to the neuropilin family.
    
 
 0.754
GATA6
GATA binding protein 6.
    
 
 0.651
SEMA3D
Semaphorin 3D; Belongs to the semaphorin family.
    
   0.585
SEMA3F
Semaphorin 3F; Belongs to the semaphorin family.
    
   0.585
PLXNC1
Plexin C1.
    
 0.582
CALCR
Calcitonin receptor; Belongs to the G-protein coupled receptor 2 family.
      
 0.581
PRDM1
PR/SET domain 1.
      
 0.562
DBX1
Developing brain homeobox 1.
      
 0.545
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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