STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAISuppressor of cancer cell invasion. (566 aa)    
Predicted Functional Partners:
MYOD1
Myogenic factor.
      
 0.610
MRPL23
Uncharacterized protein.
      
 0.543
PGK1
Phosphoglycerate kinase.
      
 0.514
SCO1
SCO cytochrome c oxidase assembly protein 1.
      
 0.509
EEF1AKMT2
EEF1A lysine methyltransferase 2; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-318'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.
      
 0.489
AFG1L
AFG1 like ATPase.
      
 0.473
CCR9
C-C motif chemokine receptor 9; Belongs to the G-protein coupled receptor 1 family.
      
 0.449
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
      
 0.444
ATP7A
ATPase copper transporting alpha.
      
 0.442
BRCA2
BRCA2 DNA repair associated.
      
 0.434
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.