STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3I8F7_ANAPPUncharacterized protein. (439 aa)    
Predicted Functional Partners:
ENSAPLP00000023501
SRCR domain-containing protein.
 
   
  0.933
LOXL1
Lysyl oxidase like 1.
 
 
 
 0.924
LOX
Lysyl oxidase.
 
 
 
 0.923
LOXL4
Lysyl oxidase like 4.
 
  
  0.908
ENSAPLP00000025208
Uncharacterized protein.
    
 0.626
AGMO
Alkylglycerol monooxygenase; Belongs to the sterol desaturase family.
      
 0.597
DCTD
dCMP deaminase.
      
 0.594
MFAP5
Microfibril associated protein 5.
   
 
 0.534
ARHGAP6
Rho GTPase activating protein 6.
    
 
 0.528
DHX15
DEAH-box helicase 15.
    
  0.517
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.