Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LTO1LTO1 maturation factor of ABCE1. (143 aa)    
Predicted Functional Partners:
YAE1
YAE1 maturation factor of ABCE1.
   
 
 0.918
ABCE1
ATP binding cassette subfamily E member 1.
    
 
 0.900
BEND6
BEN domain containing 6.
    
   0.706
U3J728_ANAPP
MMS19_N domain-containing protein.
    
 
 0.701
METTL25
Methyltransferase like 25.
   
  
 0.687
FGF19
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.670
VPS11
Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family.
    
   0.614
FGF4
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.556
FGF3
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.555
CHRAC1
Chromatin accessibility complex subunit 1.
      
 0.545
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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