STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3I8G6_ANAPPHelicase ATP-binding domain-containing protein. (325 aa)    
Predicted Functional Partners:
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
 
    
 0.893
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
   
 0.787
GTF2H1
General transcription factor IIH subunit 1.
    
 0.772
GTF2H2
General transcription factor IIH subunit.
    
 0.772
GTF2H3
General transcription factor IIH subunit 3.
    
 0.769
MNAT1
MNAT1 component of CDK activating kinase.
    
 0.767
SLF1
SMC5-SMC6 complex localization factor 1.
   
 0.766
CCNH
Cyclin H; Belongs to the cyclin family.
    
 0.763
CDK7
Cyclin dependent kinase 7; Belongs to the protein kinase superfamily.
    
 0.763
U3I2H1_ANAPP
Uncharacterized protein.
  
 0.747
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.