STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX29Sorting nexin 29. (739 aa)    
Predicted Functional Partners:
PREX1
Phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1.
      
 0.716
RIMS4
Regulating synaptic membrane exocytosis 4.
      
 0.637
FAM43A
Family with sequence similarity 43 member A.
      
 0.620
NATD1
N-acetyltransferase domain containing 1.
     
 0.612
CBY1
Chibby family member 1, beta catenin antagonist.
      
 0.612
GDE1
Glycerophosphodiester phosphodiesterase 1.
      
 0.611
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.555
DLAT
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
      
 0.554
MAP3K14
Mitogen-activated protein kinase kinase kinase 14.
      
 0.548
SAMD8
Sterile alpha motif domain containing 8.
      
 0.548
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.