STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC6Leucine rich repeat containing 6. (418 aa)    
Predicted Functional Partners:
ZMYND10
Zinc finger MYND-type containing 10.
    
 0.879
ARMC4
Armadillo repeat containing 4.
   
 
 0.769
CCDC39
Coiled-coil domain containing 39.
   
 0.760
U3I2X0_ANAPP
Uncharacterized protein.
   
 
 0.757
DNAI1
Dynein axonemal intermediate chain 1.
    
 
 0.676
DNAH8
Dynein axonemal heavy chain 8.
   
 
 0.667
ENSAPLP00000019966
Uncharacterized protein.
   
 
 0.666
ENSAPLP00000023036
Uncharacterized protein.
   
 
 0.666
DNAI2
Dynein axonemal intermediate chain 2.
    
 
 0.663
ENSAPLP00000031927
Uncharacterized protein.
    
 
 0.663
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.