Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PLD6Phospholipase D family member 6. (217 aa)    
Predicted Functional Partners:
PNLDC1
PARN like, ribonuclease domain containing 1.
      
 0.856
FEM1B
Fem-1 homolog B.
    
  0.755
ASZ1
ANK_REP_REGION domain-containing protein.
   
 0.744
HENMT1
HEN methyltransferase 1.
      
 0.729
MOV10L1
Mov10 like RISC complex RNA helicase 1.
    
 
 0.704
MOV10
Mov10 RISC complex RNA helicase.
    
 
 0.704
PLD4
Phospholipase D family member 4.
     
 0.703
TDRD9
Tudor domain containing 9.
   
  
 0.691
FKBP6
Peptidylprolyl isomerase.
  
 
 0.689
FAM118A
Family with sequence similarity 118 member A.
    
 0.675
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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