Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHD1Pleckstrin homology and coiled-coil domain containing D1. (503 aa)    
Predicted Functional Partners:
SLC39A9
Solute carrier family 39 member 9.
 
    
 0.673
SLC10A1
Solute carrier family 10 member 1.
      
 0.665
RNF165
Ring finger protein 165.
      
 0.499
SLC39A6
Solute carrier family 39 member 6.
      
 0.447
MCF2
MCF.2 cell line derived transforming sequence.
      
 0.440
KLHDC10
Kelch domain containing 10.
   
  
 0.410
ACOT8
Uncharacterized protein.
      
 0.407
ENSAPLP00000024120
Uncharacterized protein.
      
 0.407
ENSAPLP00000031947
Uncharacterized protein.
      
 0.407
OCSTAMP
Osteoclast stimulatory transmembrane protein.
      
 0.404
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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