TRAIP protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

TRAIP

Uncharacterized protein. (375 aa)

Predicted Functional Partners:

ENSAPLP00000031406

0.888

NEIL3

0.618

FANCD2

0.565

CDC45

0.563

MON1A

0.499

SPRTN

0.499

CDHR4

0.433

FANCM

0.432

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC45	ENSAPLP00000031406	ENSAPLP00000020547	ENSAPLP00000031406	Cell division cycle 45.	RING-type domain-containing protein.	0.563
CDC45	FANCD2	ENSAPLP00000020547	ENSAPLP00000022164	Cell division cycle 45.	Uncharacterized protein.	0.669
CDC45	FANCM	ENSAPLP00000020547	ENSAPLP00000027475	Cell division cycle 45.	FA complementation group M.	0.642
CDC45	NEIL3	ENSAPLP00000020547	ENSAPLP00000013102	Cell division cycle 45.	Nei like DNA glycosylase 3.	0.640
CDC45	SPRTN	ENSAPLP00000020547	ENSAPLP00000013129	Cell division cycle 45.	SprT-like N-terminal domain.	0.623
CDC45	TRAIP	ENSAPLP00000020547	ENSAPLP00000003650	Cell division cycle 45.	Uncharacterized protein.	0.563
CDHR4	ENSAPLP00000031406	ENSAPLP00000025058	ENSAPLP00000031406	Uncharacterized protein.	RING-type domain-containing protein.	0.433
CDHR4	MON1A	ENSAPLP00000025058	ENSAPLP00000003373	Uncharacterized protein.	MON1 homolog A, secretory trafficking associated.	0.819
CDHR4	TRAIP	ENSAPLP00000025058	ENSAPLP00000003650	Uncharacterized protein.	Uncharacterized protein.	0.433
ENSAPLP00000031406	CDC45	ENSAPLP00000031406	ENSAPLP00000020547	RING-type domain-containing protein.	Cell division cycle 45.	0.563
ENSAPLP00000031406	CDHR4	ENSAPLP00000031406	ENSAPLP00000025058	RING-type domain-containing protein.	Uncharacterized protein.	0.433
ENSAPLP00000031406	FANCD2	ENSAPLP00000031406	ENSAPLP00000022164	RING-type domain-containing protein.	Uncharacterized protein.	0.565
ENSAPLP00000031406	FANCM	ENSAPLP00000031406	ENSAPLP00000027475	RING-type domain-containing protein.	FA complementation group M.	0.432
ENSAPLP00000031406	MON1A	ENSAPLP00000031406	ENSAPLP00000003373	RING-type domain-containing protein.	MON1 homolog A, secretory trafficking associated.	0.499
ENSAPLP00000031406	NEIL3	ENSAPLP00000031406	ENSAPLP00000013102	RING-type domain-containing protein.	Nei like DNA glycosylase 3.	0.618
ENSAPLP00000031406	SPRTN	ENSAPLP00000031406	ENSAPLP00000013129	RING-type domain-containing protein.	SprT-like N-terminal domain.	0.499
ENSAPLP00000031406	TRAIP	ENSAPLP00000031406	ENSAPLP00000003650	RING-type domain-containing protein.	Uncharacterized protein.	0.888
FANCD2	CDC45	ENSAPLP00000022164	ENSAPLP00000020547	Uncharacterized protein.	Cell division cycle 45.	0.669
FANCD2	ENSAPLP00000031406	ENSAPLP00000022164	ENSAPLP00000031406	Uncharacterized protein.	RING-type domain-containing protein.	0.565
FANCD2	FANCM	ENSAPLP00000022164	ENSAPLP00000027475	Uncharacterized protein.	FA complementation group M.	0.999