STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBA5Ubiquitin like modifier activating enzyme 5. (390 aa)    
Predicted Functional Partners:
UFM1
Ubiquitin-fold modifier 1; Ubiquitin-like modifier which can be covalently attached to substrate proteins as a monomer or a lysine-linked polymer in a post- translational process called ufmylation. Ufmylation on lysine residues of proteins may play a crucial role in a number of cellular processes.
    
 
 0.992
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.967
BOLL
Boule homolog, RNA binding protein.
    
   0.941
SEC63
SEC63 homolog, protein translocation regulator.
   
  
 0.923
UFL1
UFM1 specific ligase 1.
   
 
 0.838
UBE2F
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.827
UBA3
Ubiquitin like modifier activating enzyme 3.
     
 0.823
GABARAPL1
GABA type A receptor associated protein like 1.
   
 0.805
CDC20
Cell division cycle 20.
    
  0.777
CDC20B
Cell division cycle 20B.
    
  0.777
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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