STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBA5Ubiquitin like modifier activating enzyme 5. (390 aa)    
Predicted Functional Partners:
UFM1
Ubiquitin-fold modifier 1; Ubiquitin-like modifier which can be covalently attached to substrate proteins as a monomer or a lysine-linked polymer in a post- translational process called ufmylation. Ufmylation on lysine residues of proteins may play a crucial role in a number of cellular processes.
    
 
 0.969
BIRC6
Baculoviral IAP repeat containing 6.
  
 0.935
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.923
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
   
 
 0.918
UFL1
UFM1 specific ligase 1.
   
 
 0.904
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.897
UBE2F
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.878
ENSAPLP00000025536
Ubiquitin-like domain-containing protein.
   
 0.798
UFSP2
UFM1 specific peptidase 2.
  
   
 0.791
UBA3
Ubiquitin like modifier activating enzyme 3.
     
 0.787
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.