Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
STAC3SH3 and cysteine rich domain 3. (367 aa)    
Predicted Functional Partners:
KLHL40
Kelch like family member 40.
   
 
 0.724
KLHL41
Kelch like family member 41.
   
 
 0.628
RBM24
RNA binding motif protein 24.
    
 
 0.595
ANKRD1
Ankyrin repeat domain 1.
   
  
 0.590
LMOD3
Leiomodin 3.
   
  
 0.557
CAPN3
Calpain 3; Belongs to the peptidase C2 family.
   
  
 0.538
SMYD1
SET and MYND domain containing 1.
   
  
 0.513
U3I3C4_ANAPP
Uncharacterized protein.
      
 0.505
RCL1
RNA terminal phosphate cyclase like 1.
      
 0.482
U3I4I0_ANAPP
Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.
   
 
 0.469
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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