Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM66Tripartite motif containing 66. (1070 aa)    
Predicted Functional Partners:
CBX3
Chromobox 3.
    
 0.871
TRIM8
Tripartite motif containing 8.
      
 0.621
ENSAPLP00000016651
RING-type domain-containing protein.
      
 0.621
U3IGU3_ANAPP
B30.2/SPRY domain-containing protein.
      
 0.548
ENSAPLP00000029980
Uncharacterized protein.
      
 0.548
PHLPP1
PH domain and leucine rich repeat protein phosphatase 1.
    
 
 0.539
CBX1
Chromobox 1.
    
 0.529
CBX5
Chromobox 5.
    
 0.529
ZNF106
WD_REPEATS_REGION domain-containing protein.
   
 0.524
ZCCHC14
Zinc finger CCHC-type containing 14.
   
 
 0.515
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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