STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OVCH2Ovochymase 2 (gene/pseudogene); Belongs to the peptidase S1 family. (571 aa)    
Predicted Functional Partners:
SLC7A10
Solute carrier family 7 member 10.
      
 0.723
TRIB2
Tribbles pseudokinase 2.
      
 0.622
MANBAL
Mannosidase beta like.
      
 0.619
NMRAL1
NmrA like redox sensor 1.
   
 
 0.614
ANKRD22
Ankyrin repeat domain 22.
    
 0.593
MET
MET proto-oncogene, receptor tyrosine kinase.
   
  0.534
MST1R
Macrophage stimulating 1 receptor.
   
  0.534
OSGEPL1
Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance.
      
 0.475
U3J4R4_ANAPP
Peptidase_M14 domain-containing protein.
   
  
 0.461
CPXM2
Peptidase_M14 domain-containing protein.
   
  
 0.461
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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