Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRY2Cryptochrome circadian regulator 2. (241 aa)    
Predicted Functional Partners:
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
   
 0.993
PER2
Period circadian regulator 2.
   
 0.984
PER3
Period circadian regulator 3.
   
 0.975
CLOCK
Clock circadian regulator.
   
 0.963
FBXL3
F-box domain-containing protein.
    
 0.950
U3IMV2_ANAPP
Uncharacterized protein.
    
 0.928
TIMELESS
Timeless circadian regulator.
    
 0.916
NPAS2
Neuronal PAS domain protein 2.
   
 0.906
BHLHE41
Basic helix-loop-helix family member e41.
    
 
 0.904
U3IC66_ANAPP
FAD_binding_7 domain-containing protein.
  
0.893
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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