STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HSF2BPHeat shock transcription factor 2 binding protein. (336 aa)    
Predicted Functional Partners:
BRCA2
BRCA2 DNA repair associated.
    
 
 0.858
TMEM183A
Transmembrane protein 183A.
      
 0.851
RNF13
Ring finger protein 13.
      
 0.773
PALB2
Partner and localizer of BRCA2.
    
 
 0.634
SPATA22
Spermatogenesis associated 22.
      
 0.514
RPA3
Replication protein A3.
      
 0.499
SYCE2
Synaptonemal complex central element protein 2.
      
 0.493
SIK1
Uncharacterized protein.
 
    
 0.475
LRRC42
Leucine rich repeat containing 42.
      
 0.469
PPP4R1
Protein phosphatase 4 regulatory subunit 1.
      
 0.456
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.