STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HIRAProtein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (978 aa)    
Predicted Functional Partners:
ASF1A
Anti-silencing function 1A histone chaperone.
    
 0.997
UBN1
Ubinuclein 1.
    
 0.983
CABIN1
TPR_REGION domain-containing protein.
    
 0.880
ENSAPLP00000029227
MEF2_binding domain-containing protein.
    
 0.880
ENSAPLP00000028245
Uncharacterized protein.
    
 
 0.654
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 
0.621
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 
 0.621
U3I833_ANAPP
Histone H3; Belongs to the histone H3 family.
    
 
 0.618
ENSAPLP00000026892
annotation not available
    
 
 0.618
HIST2H3PS2
Histone cluster 2 H3 pseudogene 2.
    
 
 0.618
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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