Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RIOK1RIO kinase 1. (463 aa)    
Predicted Functional Partners:
LTV1
Uncharacterized protein.
   
 0.994
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.988
COPRS
Uncharacterized protein.
    
 
 0.972
BYSL
Bystin like.
   
 0.965
TSR1
TSR1 ribosome maturation factor.
   
 0.964
RPS2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.936
WDR77
WD repeat domain 77.
   
 
 0.930
ENSAPLP00000021357
Uncharacterized protein.
   
 
 0.924
PNO1
Partner of NOB1 homolog.
   
 0.922
RPS14
Ribosomal protein S14.
   
 0.918
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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