STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRNT1tRNA nucleotidyl transferase 1; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (432 aa)    
Predicted Functional Partners:
KLHL32
Kelch like family member 32.
      
 0.804
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
  
 0.731
APMAP
Adipocyte plasma membrane associated protein.
  
 0.728
EPRS1
Glutamyl-prolyl-tRNA synthetase.
  
  
 0.726
YARS1
Tyrosine--tRNA ligase.
  
 
 0.705
HLCS
Holocarboxylase synthetase.
  
  
 0.702
ITPRIPL2
ITPRIP like 2.
      
 0.684
BLOC1S2
Biogenesis of lysosomal organelles complex 1 subunit 2.
      
 0.664
ELAC1
ElaC ribonuclease Z 1.
  
  
 0.649
ANTXRL
ANTXR like.
      
 0.646
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.