STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D22ATBC1 domain family member 22A. (513 aa)    
Predicted Functional Partners:
RBM12B
RNA binding motif protein 12B.
      
 0.820
TRABD
TraB domain containing.
      
 0.749
USP32
Uncharacterized protein; Belongs to the peptidase C19 family.
    
 
 0.690
RPL8
Ribosomal protein L8.
    
 
 0.679
ENSAPLP00000017261
Uncharacterized protein.
      
 0.621
ACBD3
Acyl-CoA binding domain containing 3.
    
 
 0.614
SGMS1
Sphingomyelin synthase 1.
      
 0.611
ENSAPLP00000020032
Uncharacterized protein; Belongs to the ATP:guanido phosphotransferase family.
      
 0.611
U3J3H3_ANAPP
Uncharacterized protein.
      
 0.610
U3I0K3_ANAPP
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]
      
 0.596
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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