STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (912 aa)    
Predicted Functional Partners:
JUP
Junction plakoglobin.
   
 0.911
CDH1
Uncharacterized protein.
    
0.868
PTPN1
Tyrosine-protein phosphatase non-receptor type.
    
 0.856
NCAM1
Neural cell adhesion molecule 1.
    
 0.849
CTNNB1
Catenin beta 1.
   
 0.846
PCDH19
Protocadherin 19.
    
 
0.826
CTNNA1
Catenin alpha 1.
    
 0.805
VCL
Vinculin.
    
 0.792
GJA1
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
   
 
 0.764
CDC42
Cell division cycle 42.
    
 0.762
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.