Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (912 aa)    
Predicted Functional Partners:
JUP
Junction plakoglobin.
   
 0.915
CTNNB1
Catenin beta 1.
   
 0.909
PTPN1
Tyrosine-protein phosphatase non-receptor type.
    
 0.905
U3I5Q2_ANAPP
Uncharacterized protein.
   
 0.801
ENSAPLP00000027045
Uncharacterized protein.
   
 0.801
CTNNA1
Catenin alpha 1.
   
 0.801
CTNNA2
Uncharacterized protein.
   
 0.769
CDC42
Cell division cycle 42.
    
 0.753
CDH12
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
    
 
0.744
CDH8
Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins.
   
0.739
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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