STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HLFHLF transcription factor, PAR bZIP family member. (391 aa)    
Predicted Functional Partners:
COX5A
Cytochrome c oxidase subunit 5A.
   
 0.639
SOBP
Sine oculis binding protein homolog.
      
 0.611
COX6A1
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.582
COA6
Cytochrome c oxidase assembly factor 6.
   
 0.570
COX7C
Cytochrome c oxidase subunit 7C.
   
 0.569
LINC01862
BZIP domain-containing protein.
    
 
0.557
NFIL3
Nuclear factor, interleukin 3 regulated.
    
 
0.557
ATF4
Activating transcription factor 4.
   
 0.554
COX4I1
Cytochrome c oxidase subunit 4I1.
   
 0.545
C1orf198
Chromosome 1 open reading frame 198.
   
 0.542
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.