Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB4AUncharacterized protein. (218 aa)    
Predicted Functional Partners:
RBSN
Rabenosyn, RAB effector.
    
 0.977
RUFY1
RUN and FYVE domain containing 1.
    
 0.961
RUFY2
RUN and FYVE domain containing 2.
    
  0.912
TBC1D16
TBC1 domain family member 16.
    
 0.728
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
    
 
 0.726
CHM
Uncharacterized protein.
    
 0.680
MRPS23
Mitochondrial ribosomal protein S23.
      
 0.679
GDI2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.645
HGS
Hepatocyte growth factor-regulated tyrosine kinase substrate.
    
 0.639
SLC5A9
Solute carrier family 5 member 9; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.634
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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