Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SV2ASynaptic vesicle glycoprotein 2A. (404 aa)    
Predicted Functional Partners:
SV2C
Synaptic vesicle glycoprotein 2C.
  
  
 
0.900
SV2B
Synaptic vesicle glycoprotein 2B.
  
  
 
0.900
LAMC2
Laminin subunit gamma 2.
     
 0.716
LAMB3
Laminin subunit beta 3.
     
 0.699
LAMC1
Laminin subunit gamma 1.
     
 0.698
LAMA3
Uncharacterized protein.
     
 0.691
LAMB1
Laminin subunit beta 1.
     
 0.691
LAMA5
Laminin subunit alpha 5.
     
 0.691
LAMA4
Laminin subunit alpha 4.
     
 0.682
LAMB2
Laminin subunit beta 2.
     
 0.677
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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