STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNTN4Contactin 4. (960 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
   
 
 0.966
PTPRG
Protein tyrosine phosphatase receptor type G.
    
 0.902
CDH4
Cadherin 4; Cadherins are calcium-dependent cell adhesion proteins.
     
 0.619
TSNARE1
t-SNARE domain containing 1.
   
 
 0.616
APLP2
Amyloid beta precursor like protein 2.
   
 
 0.563
NFASC
Uncharacterized protein.
   
0.557
ENSAPLP00000029866
Bravo_FIGEY domain-containing protein.
 
 
 0.557
NRCAM
Neuronal cell adhesion molecule.
    
0.554
CHL1
Cell adhesion molecule L1 like.
    
0.554
CNTNAP2
Contactin associated protein like 2.
   
 0.525
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.