Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNTN4Contactin 4. (960 aa)    
Predicted Functional Partners:
PTPRG
Protein tyrosine phosphatase receptor type G.
    
 0.806
CNTNAP2
Contactin associated protein like 2.
   
 0.606
CNTNAP4
Uncharacterized protein.
   
 0.558
ENSAPLP00000018230
Uncharacterized protein.
   
 0.558
MEGF11
Multiple EGF like domains 11.
   
  
 0.552
NRCAM
Neuronal cell adhesion molecule.
   
 0.543
CHL1
Cell adhesion molecule L1 like.
   
 0.543
NFASC
Uncharacterized protein.
   
 0.543
ENSAPLP00000029866
Bravo_FIGEY domain-containing protein.
   
 0.543
APP
Amyloid beta precursor protein.
   
 
 0.535
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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