CUX2 protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CUX2

Homeobox protein cut-like. (1469 aa)

Predicted Functional Partners:

ENSAPLP00000028194

0.712

FEZF2

0.642

PHETA2

0.598

SATB2

0.566

TBX2

0.565

DLL1

0.560

SOX5

0.547

MECOM

0.518

TKT

0.508

RORB

0.508

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUX2	DLL1	ENSAPLP00000003909	ENSAPLP00000011451	Homeobox protein cut-like.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.560
CUX2	ENSAPLP00000028194	ENSAPLP00000003909	ENSAPLP00000028194	Homeobox protein cut-like.	CASP_C domain-containing protein.	0.712
CUX2	FEZF2	ENSAPLP00000003909	ENSAPLP00000030130	Homeobox protein cut-like.	FEZ family zinc finger 2.	0.642
CUX2	MECOM	ENSAPLP00000003909	ENSAPLP00000018712	Homeobox protein cut-like.	MDS1 and EVI1 complex locus.	0.518
CUX2	PHETA2	ENSAPLP00000003909	ENSAPLP00000024400	Homeobox protein cut-like.	PH domain containing endocytic trafficking adaptor 2.	0.598
CUX2	RORB	ENSAPLP00000003909	ENSAPLP00000018588	Homeobox protein cut-like.	RAR related orphan receptor B.	0.508
CUX2	SATB2	ENSAPLP00000003909	ENSAPLP00000007781	Homeobox protein cut-like.	DNA-binding protein SATB.	0.566
CUX2	SOX5	ENSAPLP00000003909	ENSAPLP00000002709	Homeobox protein cut-like.	SRY-box transcription factor 5.	0.547
CUX2	TBX2	ENSAPLP00000003909	ENSAPLP00000024340	Homeobox protein cut-like.	Uncharacterized protein.	0.565
CUX2	TKT	ENSAPLP00000003909	ENSAPLP00000016856	Homeobox protein cut-like.	Transketolase.	0.508
DLL1	CUX2	ENSAPLP00000011451	ENSAPLP00000003909	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Homeobox protein cut-like.	0.560
ENSAPLP00000028194	CUX2	ENSAPLP00000028194	ENSAPLP00000003909	CASP_C domain-containing protein.	Homeobox protein cut-like.	0.712
ENSAPLP00000028194	FEZF2	ENSAPLP00000028194	ENSAPLP00000030130	CASP_C domain-containing protein.	FEZ family zinc finger 2.	0.431
ENSAPLP00000028194	SATB2	ENSAPLP00000028194	ENSAPLP00000007781	CASP_C domain-containing protein.	DNA-binding protein SATB.	0.456
FEZF2	CUX2	ENSAPLP00000030130	ENSAPLP00000003909	FEZ family zinc finger 2.	Homeobox protein cut-like.	0.642
FEZF2	ENSAPLP00000028194	ENSAPLP00000030130	ENSAPLP00000028194	FEZ family zinc finger 2.	CASP_C domain-containing protein.	0.431
FEZF2	RORB	ENSAPLP00000030130	ENSAPLP00000018588	FEZ family zinc finger 2.	RAR related orphan receptor B.	0.437
FEZF2	SATB2	ENSAPLP00000030130	ENSAPLP00000007781	FEZ family zinc finger 2.	DNA-binding protein SATB.	0.646
FEZF2	SOX5	ENSAPLP00000030130	ENSAPLP00000002709	FEZ family zinc finger 2.	SRY-box transcription factor 5.	0.600
MECOM	CUX2	ENSAPLP00000018712	ENSAPLP00000003909	MDS1 and EVI1 complex locus.	Homeobox protein cut-like.	0.518