STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUX2Homeobox protein cut-like. (1469 aa)    
Predicted Functional Partners:
ENSAPLP00000028194
CASP_C domain-containing protein.
 
  
 
 0.706
SATB2
DNA-binding protein SATB.
    
 
 0.651
FEZF2
FEZ family zinc finger 2.
    
 
 0.639
CCDC92
Coiled-coil domain containing 92.
      
 0.611
TBR1
Uncharacterized protein.
    
 
 0.598
ENSAPLP00000018750
Uncharacterized protein.
    
 
 0.598
PPM1F
Protein phosphatase, Mg2+/Mn2+ dependent 1F.
      
 0.586
ETV1
ETS variant 1.
      
 0.586
ORC3
Origin recognition complex subunit 3.
    
 
 0.569
SATB1
DNA-binding protein SATB.
    
 
 0.508
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.