Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPATA22Spermatogenesis associated 22. (349 aa)    
Predicted Functional Partners:
MEIOB
Meiosis specific with OB-fold.
      
 0.851
HSF2BP
Heat shock transcription factor 2 binding protein.
      
 0.666
IQCB1
IQ motif containing B1.
      
 0.664
FANCB
FA complementation group B.
      
 0.664
SPATA4
Spermatogenesis associated 4.
      
 0.616
SPATA17
Spermatogenesis associated 17.
      
 0.606
SPO11
SPO11 initiator of meiotic double stranded breaks.
      
 0.593
MCMDC2
Minichromosome maintenance domain containing 2.
      
 0.593
U3I160_ANAPP
Cor1 domain-containing protein.
      
 0.582
SYCE3
Uncharacterized protein.
      
 0.574
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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